# STOCKHOLM 1.0
#=GF AU Infernal 1.0

Purine1      AAAAUUGAAUAUCGUUUUACUUGUUUAUGUC-GUGAAU-UGGCAC-GACG
Purine2      AAAAUUUAAUAA-GAAGCACUCAUAUAAUCCCGAGAAUAUGGCUCGGGAG
Purine3      UGGCAGUAACUAGCGUCACUUCGUAUAACCCCAGUGAUAUGGAUUGGGGG
#=GC SS_cons :::::::::::::::::((((((((,,,<<<-<<<_______>>>->>>,
#=GC RF      AAAAUUuAAUAacGaaucACucauaUAagcCcGaGAAUAUGGCuCgGgcG

Purine1      UUUCUACAAGGUG-CCGGAA--CACCUAACAAUAAGUAAGUCAGCAGUGA
Purine2      UCUCUACCGAACAACCGUAAAUUGUUCGACUAUGAGUGAAAGUGUACCUA
Purine3      UCUCUACCAGGAACCAAUAA--AUCCUGAUUACGAAGAGUUUAGUGCUUU
#=GC SS_cons ,,,,,,,<<<<<<_________>>>>>>,,))))))))::::::::::::
#=GC RF      UuUCUACcgggcgACCGuAAAucgcccgACuaugaGUgAaagaGuAguuA

Purine1      GAU
Purine2      GGG
Purine3      AGU
#=GC SS_cons :::
#=GC RF      Gau
//
